Basic Information
Locus ID:
Zosma02g14880.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 32535607 | 32537159 | + | Zosma02g14880.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 25,835.02 Da | 25.63 | 89.53 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 72 | 199 | 1.0E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 25 | 212 | 3.13E-29 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 72 | 225 | 2.1E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 31 | 71 | 6.9E-7 | - |
| SMART | SM00220 | serkin_6 | 36 | 205 | 0.0024 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 205 | 12.146067 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 42 | 65 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_023885742.1 | - | 0 |
| Q9LIG2 | Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana OX=3702 GN=At3g21340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PJT8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0532990 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_057047 |
| Poaceae | Oryza coarctata | 1 | Oco21G010000 |
| Poaceae | Oryza sativa | 2 | LOC_Os09g17890.1, LOC_Os09g22300.1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G552100 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-13861 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc05g10600, gene.Posoc08g12640 |
| Rhizophoraceae | Rhizophora mangle | 6 | nbisL1-mrna-21362, nbisL1-mrna-24214, nbisL1-mrna-24215 ... |
| Zosteraceae | Zostera marina | 1 | Zosma02g14880.v3.1 |