Basic Information
Locus ID:
Zosma02g13540.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 29079404 | 29082679 | + | Zosma02g13540.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 79,052.50 Da | 46.41 | 88.55 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 157 | 248 | 1.2E-10 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 370 | 642 | 2.4E-46 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 35 | 131 | 1.1E-14 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 648 | 9.98E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 442 | 1.6E-27 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 251 | 4.9E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 30 | 134 | 3.5E-18 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 443 | 659 | 6.5E-48 | - |
| SMART | SM00220 | serkin_6 | 369 | 646 | 7.3E-29 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 134 | 16.624632 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 648 | 37.855812 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 143 | 251 | 15.02241 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 489 | 501 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 375 | 397 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 282 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_023894216.1 | cysteine-rich receptor-like protein kinase 25 [Quercus suber] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9PDI2 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Zosteraceae | Zostera marina | 14 | Zosma02g13370.v3.1, Zosma02g13390.v3.1, Zosma02g13420.v3.1 ... |