Basic Information
Locus ID:
Zosma02g08850.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 12485824 | 12486617 | + | Zosma02g08850.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.96 | 22,969.00 Da | 50.48 | 80.39 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 42 | 155 | 1.4E-23 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 159 | 1.17E-39 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 24 | 80 | 2.7E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 81 | 192 | 1.1E-23 | - |
| SMART | SM00220 | serkin_6 | 9 | 202 | 1.4E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 204 | 19.877363 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 126 | 138 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18610.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020267368.1 | - | 0 |
| Q1PDV6 | Serine/threonine-protein kinase PBL27 OS=Arabidopsis thaliana OX=3702 GN=PBL27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NVB5 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.5HG0431410.1, HORVU.MOREX.r3.5HG0431510.1 |
| Zosteraceae | Zostera marina | 1 | Zosma02g08850.v3.1 |