Basic Information
Locus ID:
Zosma02g01290.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Alpha mannosidase, middle domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 1445370 | 1543226 | + | Zosma02g01290.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 115,609.37 Da | 34.25 | 86.25 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 39 | 315 | 2.26507E-178 | - |
| Pfam | PF09261 | Alpha mannosidase middle domain | 357 | 447 | 5.3E-21 | IPR015341 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 895 | 1000 | 2.4E-9 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 40 | 351 | 4.5E-93 | IPR000602 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 600 | 812 | 2.9E-46 | IPR011682 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 454 | 1003 | 2.83E-138 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 356 | 450 | 2.29E-27 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 28 | 352 | 7.78E-106 | IPR011330 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 39 | 319 | 4.7E-121 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 399 | 453 | 7.6E-21 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 880 | 1006 | 1.7E-33 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 474 | 599 | 7.7E-29 | IPR013780 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 320 | 398 | 2.5E-29 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 600 | 861 | 6.6E-93 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 356 | 430 | 1.8E-23 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13980.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_010942369.1 | alpha-mannosidase At3g26720 isoform X1 [Elaeis guineensis] | 0 |
| Q8LPJ3 | Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g13980 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9SMM5 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology