Basic Information
Locus ID:
Zosma01g42570.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 42331029 | 42334289 | - | Zosma01g42570.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 77,719.86 Da | 37.63 | 83.81 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 424 | 696 | 5.7E-40 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 140 | 199 | 1.8E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 64 | 4.5E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 403 | 696 | 2.32E-67 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 234 | 1.02E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 501 | 706 | 2.1E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 257 | 1.0E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 380 | 500 | 2.9E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 421 | 699 | 33.686283 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 188 | 210 | 7.488635 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 427 | 450 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 286 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_009383597.1 | - | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PEM3 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology