Basic Information
Locus ID:
Zosma01g37380.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Ubiquitin associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 39432806 | 39435019 | + | Zosma01g37380.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 83,111.12 Da | 50.02 | 46.16 | -1.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 96 | 139 | 8.522677 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 498 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 383 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26920.1 | Ubiquitin-associated/translation elongation factor EF1B protein. | 0 |
| RefSeq | XP_028202729.1 | - | 0 |
| TrEMBL | A0A0K9PSU6 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Zosteraceae | Zostera marina | 10 | Zosma01g37380.v3.1, Zosma04g11760.v3.1, Zosma04g11780.v3.1 ... |