Basic Information
Locus ID:
Zosma01g35710.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 38306663 | 38309074 | - | Zosma01g35710.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 72,612.12 Da | 48.33 | 83.76 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 20 | 124 | 4.40188E-45 | - |
| Pfam | PF03000 | NPH3 family | 215 | 493 | 1.5E-90 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 28 | 114 | 1.9E-7 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 130 | 3.37E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 11 | 136 | 5.8E-12 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 98 | 10.406092 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 215 | 517 | 91.878136 | IPR027356 |
| Coils | Coil | Coil | 562 | 596 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_012485349.2 | - | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9P6E4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology