Basic Information
Locus ID:
Zosma01g35550.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 38070817 | 38079954 | - | Zosma01g35550.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 112,878.84 Da | 33.21 | 92.02 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 682 | 945 | 1.15769E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 679 | 945 | 3.0E-46 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 280 | 340 | 1.4E-7 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 416 | 596 | 2.0E-37 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 84 | 376 | 7.14E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 653 | 945 | 6.29E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 753 | 952 | 2.7E-57 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 416 | 601 | 1.7E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 265 | 3.2E-49 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 638 | 752 | 3.4E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 410 | 1.3E-19 | IPR032675 |
| SMART | SM00220 | serkin_6 | 676 | 921 | 7.0E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 676 | 951 | 35.255154 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 797 | 809 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 682 | 705 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56145.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_020103078.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Ananas comosus] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9P459 | Putative LRR receptor-like serine/threonine-protein kinase OS=Zostera marina OX=29655 GN=ZOSMA_39G00440 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology