Basic Information
Locus ID:
Zosma01g35390.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 37961567 | 37975293 | + | Zosma01g35390.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 136,663.91 Da | 44.11 | 78.28 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14137 | STKc_GSK3 | 884 | 1177 | 0.0 | IPR039192 |
| CDD | cd08875 | START_ArGLABRA2_like | 252 | 484 | 8.41954E-85 | - |
| CDD | cd00086 | homeodomain | 49 | 106 | 1.09775E-17 | IPR001356 |
| Pfam | PF01852 | START domain | 261 | 485 | 3.9E-41 | IPR002913 |
| Pfam | PF00046 | Homeodomain | 49 | 104 | 3.7E-17 | IPR001356 |
| Pfam | PF00069 | Protein kinase domain | 888 | 1174 | 3.2E-62 | IPR000719 |
| SUPERFAMILY | SSF46689 | Homeodomain-like | 36 | 104 | 2.22E-18 | IPR009057 |
| SUPERFAMILY | SSF55961 | Bet v1-like | 504 | 680 | 2.61E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 887 | 1194 | 3.24E-86 | IPR011009 |
| SUPERFAMILY | SSF55961 | Bet v1-like | 252 | 485 | 1.29E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 873 | 967 | 9.3E-33 | - |
| Gene3D | G3DSA:1.10.10.60 | - | 24 | 105 | 1.8E-19 | - |
| Gene3D | G3DSA:3.30.530.20 | - | 260 | 486 | 1.0E-5 | IPR023393 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 976 | 1200 | 5.5E-73 | - |
| SMART | SM00234 | START_1 | 257 | 485 | 9.0E-31 | IPR002913 |
| SMART | SM00389 | HOX_1 | 48 | 110 | 2.8E-18 | IPR001356 |
| SMART | SM00220 | serkin_6 | 888 | 1174 | 6.5E-91 | IPR000719 |
| ProSiteProfiles | PS50071 | 'Homeobox' domain profile. | 46 | 106 | 17.297005 | IPR001356 |
| ProSiteProfiles | PS50848 | START domain profile. | 248 | 488 | 39.550377 | IPR002913 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 888 | 1174 | 43.876896 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 894 | 917 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1011 | 1023 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 704 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| Coils | Coil | Coil | 832 | 852 | - | - |
| Coils | Coil | Coil | 100 | 132 | - | - |
| Coils | Coil | Coil | 684 | 704 | - | - |
| Coils | Coil | Coil | 148 | 168 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61150.1 | homeodomain GLABROUS 1. Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. | 0 |
| RefSeq | XP_010919252.1 | homeobox-leucine zipper protein ROC5 isoform X2 [Elaeis guineensis] | 0 |
| Q9M2E8 | Homeobox-leucine zipper protein HDG1 OS=Arabidopsis thaliana OX=3702 GN=HDG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P3L7 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for Zosma01g35390.v3.1.