Basic Information
Locus ID:
Zosma01g32110.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 35600782 | 35602241 | + | Zosma01g32110.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 24,095.17 Da | 52.39 | 57.27 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00201 | WW | 17 | 46 | 0.00267723 | IPR001202 |
| SUPERFAMILY | SSF51045 | WW domain | 7 | 48 | 6.68E-9 | IPR036020 |
| Gene3D | G3DSA:2.20.70.10 | - | 10 | 58 | 8.7E-6 | - |
| SMART | SM00456 | ww_5 | 15 | 48 | 1.5E-4 | IPR001202 |
| ProSiteProfiles | PS50020 | WW/rsp5/WWP domain profile. | 14 | 48 | 10.501901 | IPR001202 |
| ProSitePatterns | PS01159 | WW/rsp5/WWP domain signature. | 20 | 46 | - | IPR001202 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 105 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01540.1 | DEAD box RNA helicase 1. RNA HELICASE DRH1 | 0 |
| RefSeq | XP_043724140.1 | - | 0 |
| Q8H136 | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9PG21 | DEAD-box ATP-dependent RNA helicase 14 OS=Zostera marina OX=29655 GN=ZOSMA_252G00120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology