Basic Information
Locus ID:
Zosma01g30210.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 34210594 | 34211451 | - | Zosma01g30210.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 20,506.50 Da | 27.16 | 101.15 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 9 | 165 | 1.6E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 168 | 2.43E-42 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 49 | 7.0E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 50 | 168 | 7.0E-44 | - |
| SMART | SM00220 | serkin_6 | 1 | 180 | 8.3E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 182 | 25.149345 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 95 | 107 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38620.1 | cyclin-dependent kinase B1;2. Encodes a member of a plant specific family of cyclin dependent kinases. | 0 |
| RefSeq | XP_009763168.1 | PREDICTED: cell division control protein 2 homolog C [Nicotiana sylvestris] | 0 |
| Q8L4P8 | Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKB1-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9PN58 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 12 | Sgl03515, Sgl08655, Sgl13622, Sgl14340, Sgl18805, Sgl19506 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120110907 |
| Brassicaceae | Brassica nigra | 2 | BniB02g081620.2N, BniB07g035400.2N |
| Poaceae | Sporobolus alterniflorus | 1 | Chr06G022720 |
| Zosteraceae | Zostera marina | 1 | Zosma01g30210.v3.1 |