Basic Information
Locus ID:
Zosma01g29710.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Random slug protein 5-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 33930875 | 33935444 | + | Zosma01g29710.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 55,485.96 Da | 42.31 | 81.46 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00170 | SEC14 | 289 | 439 | 4.58764E-34 | IPR001251 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 55 | 185 | 9.1E-16 | IPR001245 |
| Pfam | PF00650 | CRAL/TRIO domain | 287 | 439 | 4.3E-33 | IPR001251 |
| SUPERFAMILY | SSF52087 | CRAL/TRIO domain | 281 | 458 | 2.09E-45 | IPR036865 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 52 | 181 | 1.57E-21 | IPR011009 |
| SUPERFAMILY | SSF46938 | CRAL/TRIO N-terminal domain | 215 | 283 | 1.06E-15 | IPR036273 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 52 | 187 | 4.4E-15 | - |
| Gene3D | G3DSA:3.40.525.10 | - | 192 | 472 | 1.1E-74 | IPR036865 |
| SMART | SM00220 | serkin_6 | 3 | 274 | 0.0042 | IPR000719 |
| SMART | SM00516 | sec14_4 | 287 | 441 | 2.0E-43 | IPR001251 |
| ProSiteProfiles | PS50191 | CRAL-TRIO lipid binding domain profile. | 281 | 444 | 19.258249 | IPR001251 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 237 | 14.025888 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08690.1 | Sec14p-like phosphatidylinositol transfer family protein. | 0 |
| RefSeq | XP_012445762.1 | - | 0 |
| Q55CU8 | Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum OX=44689 GN=pitC PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9PJ43 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology