Basic Information
Locus ID:
Zosma01g28050.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 32761589 | 32762648 | - | Zosma01g28050.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.69 | 37,639.34 Da | 49.14 | 85.27 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 124 | 327 | 7.8E-11 | IPR025886 |
| Pfam | PF00646 | F-box domain | 16 | 60 | 5.5E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 79 | 4.97E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 57 | 1.5E-8 | - |
| SMART | SM00256 | fbox_2 | 19 | 59 | 4.3E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 13 | 59 | 10.265807 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02360.1 | phloem protein 2-B10. | 0 |
| RefSeq | XP_010241135.1 | - | 0 |
| Q9ZVQ6 | F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PID8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Zosteraceae | Zostera marina | 7 | Zosma01g02930.v3.1, Zosma01g06210.v3.1, Zosma01g10120.v3.1 ... |