Basic Information
Locus ID:
Zosma01g27580.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 32376173 | 32379591 | - | Zosma01g27580.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 56,964.11 Da | 60.51 | 60.30 | -1.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 475 | 506 | 3.6E-7 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 374 | 458 | 7.5E-21 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 374 | 459 | 1.3E-29 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 243 | - | - |
| Coils | Coil | Coil | 373 | 400 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_042517871.1 | - | 0 |
| TrEMBL | A0A0K9PLC6 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology