Basic Information
Locus ID:
Zosma01g26240.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 31057125 | 31060608 | + | Zosma01g26240.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 125,348.24 Da | 41.53 | 112.55 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 849 | 1118 | 1.9E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 1.1E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 487 | 546 | 2.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 244 | 304 | 3.7E-10 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 228 | 591 | 3.3E-66 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 832 | 1123 | 2.43E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 535 | 748 | 3.74E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 304 | 5.78E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 145 | 6.6E-22 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 918 | 1125 | 8.4E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 219 | 3.2E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 460 | 773 | 1.1E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 220 | 459 | 1.5E-71 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 811 | 917 | 7.9E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 267 | 290 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 315 | 7.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 702 | 726 | 9.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 339 | 363 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 509 | 533 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 581 | 605 | 9.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 387 | 411 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 435 | 459 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 218 | 79.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 846 | 1122 | 8.0E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 123 | 147 | 330.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 704 | 727 | 7.427029 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 846 | 1122 | 36.569618 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 852 | 875 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 962 | 974 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 702 | 715 | 5.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 608 | 621 | 5.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17750.1 | PEP1 receptor 2. Encodes PEPR2, a plasma membrane leucine-rich repeat receptor kinase functioning as a receptor for the Pep1 and Pep2 peptides. Pep1 and Pep2 are amino acids that induce the transcription of defense-related genes. | 0 |
| RefSeq | XP_019702661.1 | receptor-like protein kinase [Elaeis guineensis] | 0 |
| Q9FZ59 | Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana OX=3702 GN=PEPR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P0Q9 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2137 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30166990 |
| Arecaceae | Cocos nucifera | 1 | COCNU_10G009110 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103711259, gene-LOC120108963 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1110.V1.1 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g19500 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1251 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00011074, Pov_00034559 |
| Poaceae | Echinochloa crus-galli | 6 | AH01.2526, AH01.2527, BH01.2855, BH01.2857, CH01.3064 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0120090, gene-QOZ80_2AG0120110 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0108800.1, HORVU.MOREX.r3.5HG0480440.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_005384, gene-QYE76_045167, gene-QYE76_045217 |
| Poaceae | Oryza coarctata | 2 | Oco20G001010, Oco20G001020 |
| Poaceae | Oryza sativa | 2 | LOC_Os10g06740.1, LOC_Os10g06760.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G254700, gene-BS78_01G254800 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0301897, Pt_Chr0301916, Pt_Chr0301917, Pt_Chr0701996 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr15G016710 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G197400, Tel5E01G350100 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG010300, gene_TRIDC5AG034110 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G090100.1.cds1, TraesCS2B02G105800.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb026550_P001, Zm00001eb034800_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-42998 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13073 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g08480 |
| Salicaceae | Populus euphratica | 1 | populus_peu29401 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132631233, gene-LOC132632151, gene-LOC132632152 |
| Solanaceae | Solanum chilense | 2 | SOLCI004878800, SOLCI004878900 |
| Zosteraceae | Zostera marina | 1 | Zosma01g26240.v3.1 |