Basic Information
Locus ID:
Zosma01g25650.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 30596625 | 30605197 | - | Zosma01g25650.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 114,584.89 Da | 40.67 | 83.14 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 35 | 311 | 0.0 | - |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 36 | 347 | 1.7E-94 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 894 | 1000 | 4.2E-11 | IPR041147 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 352 | 444 | 5.2E-19 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 598 | 812 | 1.1E-43 | IPR011682 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 457 | 1003 | 7.85E-136 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 351 | 444 | 5.23E-27 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 24 | 348 | 3.22E-106 | IPR011330 |
| Gene3D | G3DSA:2.60.40.1180 | - | 472 | 597 | 9.8E-31 | IPR013780 |
| Gene3D | G3DSA:2.70.98.30 | - | 598 | 860 | 3.1E-91 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 316 | 393 | 6.8E-30 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 879 | 1006 | 3.3E-34 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 394 | 451 | 5.0E-22 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 35 | 315 | 5.5E-121 | IPR027291 |
| SMART | SM00872 | Alpha_mann_mid_2 | 352 | 426 | 7.3E-22 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_010929675.1 | alpha-mannosidase At3g26720 [Elaeis guineensis] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9Q1F5 | Alpha-mannosidase OS=Zostera marina OX=29655 GN=ZOSMA_11G00200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology