Basic Information
Locus ID:
Zosma01g22140.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 27466612 | 27469680 | + | Zosma01g22140.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.77 | 107,773.25 Da | 30.51 | 108.03 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 701 | 979 | 6.1E-41 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 244 | 266 | 0.15 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 180 | 2.8E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 531 | 590 | 1.4E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 70 | 6.7E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 693 | 981 | 3.1E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 307 | 623 | 1.13E-51 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 400 | 4.0E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 230 | 334 | 2.5E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 778 | 987 | 2.0E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 143 | 1.3E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 229 | 2.9E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 667 | 777 | 1.4E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 628 | 3.8E-82 | IPR032675 |
| SMART | SM00220 | serkin_6 | 699 | 988 | 4.7E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 120 | 144 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 553 | 577 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 168 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 505 | 529 | 7.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 481 | 503 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 313 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 30.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 982 | 37.50246 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 822 | 834 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 532 | 545 | 6.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 553 | 566 | 6.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_010266812.1 | - | 0 |
| Q5Z9N5 | Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P8C3 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology