Basic Information
Locus ID:
Zosma01g20000.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 24923693 | 24927015 | + | Zosma01g20000.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.48 | 47,650.74 Da | 41.08 | 116.24 | 0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 15 | 413 | 6.45627E-51 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 55 | 377 | 8.4E-26 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 55 | 412 | 9.16E-37 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 24 | 413 | 4.6E-35 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 423 | 9.165608 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 73 | 89 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_006851495.2 | - | 0 |
| TrEMBL | A0A0K9PHV3 | Hippocampus abundant transcript-like protein OS=Zostera marina OX=29655 GN=ZOSMA_258G00070 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology