Basic Information
Locus ID:
Zosma01g19160.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Short Name:
RAPTOR1
Description:
Regulatory-associated protein of
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 24109003 | 24125327 | - | Zosma01g19160.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 151,093.47 Da | 47.19 | 90.23 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13646 | HEAT repeats | 668 | 749 | 2.6E-6 | - |
| Pfam | PF14538 | Raptor N-terminal CASPase like domain | 130 | 281 | 6.2E-63 | IPR029347 |
| SUPERFAMILY | SSF48371 | ARM repeat | 480 | 882 | 2.63E-30 | IPR016024 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1063 | 1365 | 3.66E-31 | IPR036322 |
| Gene3D | G3DSA:3.40.50.1460 | - | 196 | 361 | 9.4E-7 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 498 | 760 | 2.8E-20 | IPR011989 |
| Gene3D | G3DSA:2.130.10.10 | - | 1053 | 1370 | 6.2E-30 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1278 | 1317 | 0.03 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1084 | 1128 | 0.1 | IPR001680 |
| SMART | SM01302 | Raptor_N_2 | 129 | 282 | 5.7E-89 | IPR029347 |
| SMART | SM00320 | WD40_4 | 1330 | 1365 | 9.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1184 | 1226 | 5.4 | IPR001680 |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 353 | 380 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 495 | 516 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 388 | 412 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 518 | 537 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 219 | 244 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 1210 | 1228 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 193 | 214 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 464 | 494 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 128 | 149 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 246 | 270 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 172 | 191 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 542 | 558 | 2.0E-154 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 315 | 335 | 2.0E-154 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04136 (Autophagy - other)
map04136 (Autophagy - other)
ko04138 (Autophagy - yeast)
map04138 (Autophagy - yeast)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G08850.1 | HEAT repeat ;WD domain, G-beta repeat protein protein. Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive. | 0 |
| RefSeq | XP_010931321.1 | regulatory-associated protein of TOR 1 [Elaeis guineensis] | 0 |
| Q93YQ1 | Regulatory-associated protein of TOR 1 OS=Arabidopsis thaliana OX=3702 GN=RAPTOR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PGB3 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg14720, jg3198 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_14560 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah031418 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_7g157690, BVRB_7g157970 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg2242, Sbi_jg34265 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2513 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005961 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl71025, Sgl74616 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000035490, gene:ENSEOMG00000039698 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.7AG0022190, CQ.Regalona.r1.7AG0022780 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30268250 |
| Apiaceae | Apium graveolens | 2 | Ag10G00972, Ag5G02810 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G004100, COCNU_12G006510 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103708869, gene-LOC103714392 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_02.299.V1.1, AsparagusV1_07.1072.V1.1 ... |
| Asteraceae | Flaveria trinervia | 2 | Ftri10G16525, Ftri9G05039 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G08850.1, AT5G01770.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10012449m.g.v1.0, Thhalv10019904m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g07250.v2.2, Sp6g41030.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB01g054320.2N, BniB01g055740.2N, BniB07g024560.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0928 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0946 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g14630 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0279s00012.v1.0, Dusal.0279s00013.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g03290 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-11969, nbisL1-mrna-4303 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.915 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00006958 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G09603 |
| Poaceae | Echinochloa crus-galli | 8 | AH04.53, AH05.58, BH04.60, CH02.2102, CH02.2472, CH04.161 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0378880, gene-QOZ80_5BG0426010 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0464830.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_003616 |
| Poaceae | Oryza coarctata | 2 | Oco22G000290, Ocoptg000061lG000460 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g01872.1, LOC_Os12g01922.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G009700, gene-BS78_08G003000 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0101003, Pt_Chr0702866, Pt_Chr0702885 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr07G022300, Chr17G007270, Chr19G011540, Chr27G004520 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G259600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG025000, gene_TRIDC5BG026250 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G149200.2, TraesCS5B02G147900.4 ... |
| Poaceae | Zea mays | 3 | Zm00001eb093980_P001, Zm00001eb195140_P002 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-40095, nbis-gene-57149 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g17510, Zma_g24612, Zma_g25443 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG03.2126, evm.TU.LG07.915, evm.TU.LG14.418 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g33950, gene.Posoc01g33960 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1891 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5656 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-1336, nbisL1-mrna-1337 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-3638, nbisL1-mrna-3639 |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000016l.744, evm.TU.utg000016l.745 ... |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017315 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4909 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13825 |
| Salicaceae | Populus euphratica | 3 | populus_peu11492, populus_peu25305, populus_peu25329 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132606757, gene-LOC132631363 |
| Solanaceae | Solanum chilense | 2 | SOLCI004127600, SOLCI004935400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107001588, gene-LOC107031079 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_5716, gene_7476 |
| Tamaricaceae | Tamarix chinensis | 2 | TC02G2387, TC07G1044 |
| Zosteraceae | Zostera marina | 1 | Zosma01g19160.v3.1 |