Basic Information
Locus ID:
Zosma01g13870.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 13035194 | 13036369 | - | Zosma01g13870.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.13 | 43,560.31 Da | 38.19 | 100.00 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 102 | 161 | 1.2E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 69 | 5.1E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 360 | 2.21E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 187 | 1.9E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 388 | 5.7E-26 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_022931249.1 | - | 0 |
| TrEMBL | A0A0K9PA45 | Leucine-rich repeat receptor-like kinase OS=Zostera marina OX=29655 GN=ZOSMA_30G01250 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology