Basic Information
Locus ID:
Zosma01g11680.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Hemerythrin HHE cation binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 9304555 | 9321797 | - | Zosma01g11680.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 259,071.86 Da | 52.82 | 79.49 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16464 | RING-H2_Pirh2 | 2146 | 2189 | 9.70262E-18 | - |
| CDD | cd12108 | Hr-like | 570 | 728 | 4.7876E-28 | - |
| CDD | cd12108 | Hr-like | 1684 | 1842 | 1.81536E-28 | - |
| CDD | cd12108 | Hr-like | 2 | 82 | 4.3259E-12 | - |
| CDD | cd12108 | Hr-like | 1066 | 1192 | 7.84208E-30 | - |
| CDD | cd12108 | Hr-like | 1326 | 1452 | 5.25847E-15 | - |
| CDD | cd12108 | Hr-like | 216 | 342 | 1.25772E-14 | - |
| Pfam | PF13639 | Ring finger domain | 2146 | 2188 | 1.1E-6 | IPR001841 |
| Pfam | PF05495 | CHY zinc finger | 904 | 979 | 5.9E-17 | IPR008913 |
| Pfam | PF14599 | Zinc-ribbon | 2194 | 2251 | 1.3E-21 | IPR039512 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 1072 | 1194 | 4.3E-9 | IPR012312 |
| Pfam | PF05495 | CHY zinc finger | 2018 | 2093 | 2.2E-17 | IPR008913 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 2084 | 2139 | 1.01E-14 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 2010 | 2074 | 4.97E-16 | IPR037274 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 896 | 960 | 1.07E-17 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 2146 | 2193 | 9.27E-8 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 970 | 1000 | 1.44E-9 | IPR037275 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 214 | 361 | 2.9E-14 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 561 | 789 | 1.6E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 2142 | 2191 | 2.6E-9 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 2218 | 2258 | 1.9E-13 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 1325 | 1471 | 1.8E-14 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 1677 | 1903 | 1.9E-22 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 1062 | 1212 | 1.1E-27 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 1 | 57 | 1.7E-5 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 58 | 102 | 3.8E-6 | - |
| SMART | SM00184 | ring_2 | 2147 | 2188 | 4.9E-5 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 897 | 966 | 24.614996 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 2147 | 2189 | 11.294285 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 2011 | 2080 | 24.718321 | IPR008913 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 969 | 1041 | 15.277498 | IPR017921 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 2083 | 2146 | 29.374363 | IPR017921 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_010906999.1 | zinc finger protein BRUTUS isoform X2 [Elaeis guineensis] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PEN6 | Zinc finger protein BRUTUS OS=Zostera marina OX=29655 GN=ZOSMA_269G00170 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology