Basic Information
Locus ID:
Zosma01g10120.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
f-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 7235726 | 7236866 | - | Zosma01g10120.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 37,409.81 Da | 44.00 | 81.23 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 134 | 322 | 1.1E-13 | IPR025886 |
| Pfam | PF00646 | F-box domain | 39 | 84 | 5.2E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 30 | 98 | 1.59E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 25 | 120 | 6.2E-8 | - |
| SMART | SM00256 | fbox_2 | 43 | 83 | 1.9E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 37 | 83 | 10.557245 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02360.1 | phloem protein 2-B10. | 0 |
| RefSeq | XP_030958590.1 | - | 0 |
| Q9ZVQ6 | F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9Q3N6 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Zosteraceae | Zostera marina | 7 | Zosma01g02930.v3.1, Zosma01g06210.v3.1, Zosma01g10120.v3.1 ... |