Basic Information
Locus ID:
Zosma01g04220.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 2830585 | 2838065 | + | Zosma01g04220.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 138,843.31 Da | 47.09 | 73.70 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 53 | 234 | 2.62E-7 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 962 | 1002 | 3.01E-5 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 963 | 1010 | 6.3E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1177 | 1192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 953 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1057 | 1085 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 699 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1101 | 1129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1017 | 1053 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 798 | 820 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 905 | 946 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 836 | 897 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 659 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 509 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1086 | 1100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 781 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1017 | 1255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 740 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1216 | 1248 | - | - |
| Coils | Coil | Coil | 1230 | 1250 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.1 | 0 | |
| RefSeq | XP_029122100.1 | uncharacterized protein LOC105050720 [Elaeis guineensis] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PTB4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology