Basic Information
Locus ID:
Zosma01g04200.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 2815485 | 2816612 | - | Zosma01g04200.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.52 | 40,606.95 Da | 35.49 | 75.01 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 24 | 367 | 6.29242E-136 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 31 | 361 | 1.5E-75 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 32 | 363 | 5.48E-65 | IPR017853 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 262 | 333 | 3.93E-11 | IPR029070 |
| Gene3D | G3DSA:3.10.50.10 | - | 261 | 332 | 4.6E-105 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 42 | 361 | 4.6E-105 | - |
| SMART | SM00636 | 2g34 | 27 | 361 | 1.8E-91 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 26 | 375 | 72.183685 | IPR001223 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_002523517.1 | - | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PTA1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology