Basic Information
Locus ID:
Zosma01g03130.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Phospho-2-dehydro-3-deoxyheptonate aldolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 2203112 | 2206291 | + | Zosma01g03130.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 76,761.75 Da | 41.72 | 85.86 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 601 | 644 | 3.22868E-16 | - |
| Pfam | PF01474 | Class-II DAHP synthetase family | 65 | 501 | 1.8E-190 | IPR002480 |
| Pfam | PF13639 | Ring finger domain | 600 | 644 | 7.1E-12 | IPR001841 |
| SUPERFAMILY | SSF51569 | Aldolase | 57 | 504 | 1.68E-191 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 586 | 650 | 4.18E-19 | - |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 236 | 506 | 3.0E-105 | IPR013785 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 568 | 649 | 4.2E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 601 | 643 | 1.8E-6 | IPR001841 |
| TIGRFAM | TIGR01358 | DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase | 65 | 506 | 9.5E-217 | IPR002480 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 601 | 644 | 12.1057 | IPR001841 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00400 (Phenylalanine, tyrosine and tryptophan biosynthesis)
map00400 (Phenylalanine, tyrosine and tryptophan biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
ko02024 (Quorum sensing)
map02024 (Quorum sensing)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33510.1 | 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase. Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis | 0 |
| RefSeq | XP_010919789.2 | phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic [Elaeis guineensis] | 0 |
| Q00218 | Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHS2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9P645 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology