Basic Information
Locus ID:
Zosma01g02560.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 1842405 | 1845745 | - | Zosma01g02560.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 64,629.45 Da | 28.87 | 95.30 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 118 | 173 | 1.9E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 329 | 350 | 1.0 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 436 | 567 | 9.4E-22 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 107 | 372 | 1.62E-49 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 432 | 574 | 5.6E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 56 | 218 | 1.3E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 219 | 401 | 3.3E-39 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53430.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_010916565.2 | probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Elaeis guineensis] | 0 |
| C0LGG8 | Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana OX=3702 GN=At1g53430 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P1T2 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Zosteraceae | Zostera marina | 3 | Zosma01g02560.v3.1, Zosma01g02580.v3.1, Zosma01g02630.v3.1 |