Basic Information
Locus ID:
Zosma01g00520.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 574424 | 577395 | - | Zosma01g00520.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 85,188.41 Da | 48.59 | 78.94 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 12 | 142 | 3.9366E-50 | - |
| Pfam | PF00582 | Universal stress protein family | 10 | 119 | 1.8E-5 | IPR006016 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 433 | 691 | 2.7E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 414 | 692 | 4.05E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 12 | 120 | 1.09E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 505 | 706 | 3.8E-50 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 9 | 140 | 8.3E-7 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 400 | 504 | 8.0E-25 | - |
| SMART | SM00220 | serkin_6 | 432 | 696 | 8.0E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 432 | 696 | 36.498947 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 550 | 562 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 715 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 712 | 766 | - | - |
| Coils | Coil | Coil | 368 | 405 | - | - |
| Coils | Coil | Coil | 308 | 328 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78940.3 | - | 0 |
| RefSeq | XP_042492006.1 | - | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9Q4L2 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology