HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Zma_g9539
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description: Serine threonine-protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr06 429915 432269 + Zma_g9539
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.59 86,556.53 Da 40.15 84.52 -0.13
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd01098 PAN_AP_plant 335 418 1.01287E-18 -
CDD cd14066 STKc_IRAK 491 755 5.19129E-92 -
CDD cd00028 B_lectin 51 169 2.76318E-17 IPR001480
Pfam PF00954 S-locus glycoprotein domain 244 316 3.3E-6 IPR000858
Pfam PF01453 D-mannose binding lectin 107 192 1.1E-18 IPR001480
Pfam PF08276 PAN-like domain 344 402 3.7E-9 IPR003609
Pfam PF00069 Protein kinase domain 488 750 1.3E-46 IPR000719
SUPERFAMILY SSF51110 alpha-D-mannose-specific plant lectins 113 186 1.44E-14 IPR036426
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 470 754 1.48E-77 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 457 559 1.5E-28 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 560 762 2.8E-59 -
Gene3D G3DSA:2.90.10.10 - 37 166 2.4E-11 IPR036426
SMART SM00473 ntp_6 345 418 0.01 IPR003609
SMART SM00108 blect_4 48 169 2.7E-13 IPR001480
SMART SM00220 serkin_6 485 753 1.2E-37 IPR000719
PIRSF PIRSF000641 SRK 16 783 2.1E-218 IPR024171
ProSiteProfiles PS50948 PAN/Apple domain profile. 338 419 8.721354 IPR003609
ProSiteProfiles PS50927 Bulb-type lectin domain profile. 42 165 11.673423 IPR001480
ProSiteProfiles PS50011 Protein kinase domain profile. 485 757 37.106709 IPR000719
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 491 513 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 604 616 - IPR008271
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation) GO:0048544 (recognition of pollen)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0004674 (protein serine/threonine kinase activity) GO:0005524 (ATP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G19130.1 S-locus lectin protein kinase family protein. 0
RefSeq XP_039845868.1 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Panicum virgatum] 0
Swiss-Prot O64477 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 0
TrEMBL A0A5J9UGP9 non-specific serine/threonine protein kinase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_32660 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_1AG0001340, gene-QOZ80_1BG0049790
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.3HG0247430.1.CDS1 ...
HORVU.MOREX.r3.3HG0247440.1.CDS1, HORVU.MOREX.r3.3HG0247450.1
Poaceae Lolium multiflorum 2 gene-QYE76_018716, gene-QYE76_051398
Poaceae Oryza coarctata 5 Oco01G005400, Oco01G005420, Oco01G005430, Oco02G005460 ...
Oco02G005490
Poaceae Oryza sativa 5 LOC_Os01g12400.2, LOC_Os01g12410.1, LOC_Os01g12420.1 ...
LOC_Os01g12430.1, LOC_Os05g16320.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G290200, gene-BS78_03G011100
Poaceae Puccinellia tenuiflora 1 Pt_Chr0204928
Poaceae Sporobolus alterniflorus 7 Chr02G021780, Chr03G000310, Chr05G012620, Chr08G005420 ...
Chr08G005450, Chr17G017470, Chr21G015970
Poaceae Thinopyrum elongatum 5 Tel2E01G036500, Tel2E01G036600, Tel3E01G266100 ...
Tel3E01G266200, Tel3E01G266500
Poaceae Triticum dicoccoides 5 gene_TRIDC3AG019800, gene_TRIDC3AG019840 ...
gene_TRIDC3BG024990, gene_TRIDC3BG025000, gene_TRIDC3BG025020
Poaceae Triticum aestivum 7 TraesCS3A02G148200.1.cds1, TraesCS3A02G148300.1.cds1 ...
TraesCS3A02G148600.1.cds1, TraesCS3B02G175400.1.cds1, TraesCS3B02G175500.1.cds1, TraesCS3D02G156200.1, TraesCS3D02G156300.1
Poaceae Zea mays 3 Zm00001eb105820_P001, Zm00001eb338920_P001 ...
Zm00001eb380540_P001
Poaceae Zoysia japonica 1 nbis-gene-24315
Poaceae Zoysia macrostachya 1 Zma_g9539
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.