Basic Information
Locus ID:
Zma_g9443
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr05 | 21693186 | 21695532 | + | Zma_g9443 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 51,743.69 Da | 46.00 | 73.92 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 284 | 319 | 1.1E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 414 | 450 | 1.1E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 325 | 365 | 9.0E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 151 | 451 | 3.75E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 110 | 452 | 8.1E-121 | IPR015943 |
| SMART | SM00320 | WD40_4 | 280 | 319 | 1.0E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 323 | 365 | 6.9E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 196 | 236 | 0.022 | IPR001680 |
| SMART | SM00320 | WD40_4 | 368 | 408 | 390.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 239 | 276 | 7.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 152 | 193 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 411 | 450 | 1.0E-7 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 287 | 319 | 11.075592 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 330 | 374 | 8.804123 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 287 | 328 | 13.516088 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 418 | 451 | 11.708317 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 418 | 451 | 14.151034 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 437 | 451 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 56 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13840.1 | FIZZY-related 3. | 0 |
| RefSeq | XP_004971426.1 | protein FIZZY-RELATED 3 [Setaria italica] | 0 |
| Q8LPL5 | Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=FZR3 PE=1 SV=1 | 0 | |
| TrEMBL | K3XHB8 | WD_REPEATS_REGION domain-containing protein OS=Setaria italica OX=4555 GN=101766533 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology