Basic Information
Locus ID:
Zma_g9202
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr05 | 20180985 | 20186915 | - | Zma_g9202 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 45,820.63 Da | 49.05 | 85.96 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 69 | 331 | 2.2E-118 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 70 | 331 | 2.67E-56 | IPR027417 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 334 | 389 | 3.66E-6 | IPR023400 |
| Gene3D | G3DSA:3.40.50.300 | - | 96 | 399 | 1.7E-109 | IPR027417 |
| SMART | SM00382 | AAA_5 | 119 | 292 | 3.7E-7 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 66 | 387 | 1.2E-134 | IPR013765 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 265 | 336 | 26.092735 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 97 | 256 | 36.773682 | IPR020588 |
| ProSitePatterns | PS00321 | recA signature. | 277 | 285 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 361 | 378 | 7.7E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 189 | 218 | 7.7E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 274 | 302 | 7.7E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 307 | 336 | 7.7E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 227 | 256 | 7.7E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 155 | 184 | 7.7E-75 | IPR013765 |
| Hamap | MF_00268 | Protein RecA [recA]. | 66 | 393 | 43.047661 | IPR013765 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 403 | - | - |
| Coils | Coil | Coil | 372 | 392 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19490.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_004970942.1 | DNA repair protein recA homolog 3, mitochondrial [Setaria italica] | 0 |
| Q9ZUP2 | DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0A9P709 | IDP355 OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology