Basic Information
Locus ID:
Zma_g912
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr01 | 6599984 | 6601387 | + | Zma_g912 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.45 | 51,535.80 Da | 56.78 | 81.52 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12678 | RING-H2 zinc finger domain | 410 | 451 | 8.4E-8 | IPR024766 |
| SUPERFAMILY | SSF57850 | RING/U-box | 402 | 457 | 2.17E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 385 | 465 | 7.6E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 411 | 450 | 0.0073 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 411 | 451 | 10.748424 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 196 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_035819143.1 | uncharacterized protein LOC103642511 [Zea mays] | 0 |
| TrEMBL | A0A5J9W516 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09457 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology