Basic Information
Locus ID:
Zma_g908
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
IAA2
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr01 | 6531162 | 6532066 | - | Zma_g908 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 24,919.90 Da | 45.55 | 61.59 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 18 | 225 | 2.1E-55 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 129 | 217 | 6.02E-17 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 130 | 229 | 6.5E-35 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 135 | 218 | 22.399675 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 128 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23050.1 | indole-3-acetic acid 7. Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. | 0 |
| RefSeq | XP_034571880.1 | auxin-responsive protein IAA12-like [Setaria viridis] | 0 |
| Q75GK1 | Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA12 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9PPC4 | Auxin-responsive protein OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology