Basic Information
Locus ID:
Zma_g8852
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr05 | 17849514 | 17852680 | - | Zma_g8852 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 93,463.83 Da | 36.76 | 79.86 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04015 | C2_plant_PLD | 6 | 150 | 3.37292E-52 | - |
| Pfam | PF13091 | PLD-like domain | 517 | 701 | 5.7E-7 | IPR025202 |
| Pfam | PF00168 | C2 domain | 37 | 121 | 1.3E-8 | IPR000008 |
| Pfam | PF12357 | Phospholipase D C terminal | 739 | 810 | 1.9E-25 | IPR024632 |
| Pfam | PF00614 | Phospholipase D Active site motif | 329 | 360 | 3.3E-5 | IPR001736 |
| SUPERFAMILY | SSF56024 | Phospholipase D/nuclease | 165 | 430 | 1.13E-29 | - |
| SUPERFAMILY | SSF56024 | Phospholipase D/nuclease | 489 | 750 | 1.62E-25 | - |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 7 | 152 | 6.08E-12 | IPR035892 |
| Gene3D | G3DSA:3.30.870.10 | Endonuclease Chain A | 188 | 456 | 2.8E-27 | - |
| Gene3D | G3DSA:3.30.870.10 | Endonuclease Chain A | 487 | 709 | 7.8E-22 | - |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 7 | 152 | 3.8E-9 | IPR035892 |
| SMART | SM00239 | C2_3c | 12 | 122 | 8.5E-9 | IPR000008 |
| SMART | SM00155 | pld_4 | 326 | 360 | 3.8 | IPR001736 |
| SMART | SM00155 | pld_4 | 666 | 693 | 4.5E-8 | IPR001736 |
| PIRSF | PIRSF036470 | PLD_plant | 2 | 820 | 0.0 | IPR011402 |
| ProSiteProfiles | PS50035 | Phospholipase D phosphodiesterase active site profile. | 326 | 360 | 9.540799 | IPR001736 |
| ProSiteProfiles | PS50035 | Phospholipase D phosphodiesterase active site profile. | 666 | 693 | 15.418399 | IPR001736 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 1 | 127 | 11.522457 | IPR000008 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko00564 (Glycerophospholipid metabolism)
map00564 (Glycerophospholipid metabolism)
ko00565 (Ether lipid metabolism)
map00565 (Ether lipid metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko04014 (Ras signaling pathway)
map04014 (Ras signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04072 (Phospholipase D signaling pathway)
map04072 (Phospholipase D signaling pathway)
map04666 (Fc gamma R-mediated phagocytosis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52570.1 | phospholipase D alpha 2. member of C2-PLD subfamily | 0 |
| RefSeq | XP_002451299.1 | phospholipase D alpha 2 [Sorghum bicolor] | 0 |
| P93844 | Phospholipase D alpha 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLD2 PE=2 SV=2 | 0 | |
| TrEMBL | C5Y8F2 | Phospholipase D OS=Sorghum bicolor OX=4558 GN=SORBI_3005G222500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology