Basic Information
Locus ID:
Zma_g8729
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
zinc finger A20 and AN1 domain-containing stress-associated protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr05 | 17021724 | 17022221 | + | Zma_g8729 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 18,506.86 Da | 57.11 | 55.21 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01428 | AN1-like Zinc finger | 104 | 141 | 7.7E-9 | IPR000058 |
| Pfam | PF01754 | A20-like zinc finger | 17 | 38 | 4.0E-10 | IPR002653 |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | 18 | 41 | 3.28E-8 | - |
| SUPERFAMILY | SSF118310 | AN1-like Zinc finger | 94 | 156 | 1.96E-20 | IPR035896 |
| Gene3D | G3DSA:4.10.1110.10 | - | 77 | 159 | 9.8E-20 | IPR035896 |
| Gene3D | G3DSA:1.20.5.4770 | - | 6 | 74 | 8.1E-11 | - |
| SMART | SM00259 | A20_3 | 15 | 39 | 4.6E-6 | IPR002653 |
| SMART | SM00154 | AN1_Zf_4 | 104 | 142 | 1.6E-5 | IPR000058 |
| ProSiteProfiles | PS51036 | Zinc finger A20-type profile. | 12 | 46 | 8.763945 | IPR002653 |
| ProSiteProfiles | PS51039 | Zinc finger AN1-type profile. | 101 | 145 | 10.61901 | IPR000058 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14225.1 | A20/AN1-like zinc finger family protein. | 0 |
| RefSeq | XP_034594672.1 | zinc finger A20 and AN1 domain-containing stress-associated protein 3-like [Setaria viridis] | 0 |
| Q3EA33 | Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana OX=3702 GN=SAP8 PE=3 SV=1 | 0 | |
| TrEMBL | A0A835E1A1 | Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Digitaria exilis OX=1010633 GN=HU200_059410 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_1AG0034460, gene-QOZ80_1AG0034540 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr05G024780, Chr05G024860 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-11828 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g8729 |