Basic Information
Locus ID:
Zma_g8459
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
E3 ubiquitin ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr05 | 15069294 | 15077674 | - | Zma_g8459 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 138,422.38 Da | 52.40 | 72.72 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 637 | 796 | 4.68906E-28 | - |
| CDD | cd16464 | RING-H2_Pirh2 | 1107 | 1150 | 1.58287E-17 | - |
| CDD | cd12108 | Hr-like | 288 | 416 | 3.17651E-19 | - |
| CDD | cd12108 | Hr-like | 39 | 165 | 8.83102E-33 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 42 | 167 | 1.1E-10 | IPR012312 |
| Pfam | PF14599 | Zinc-ribbon | 1155 | 1212 | 1.4E-23 | IPR039512 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 635 | 797 | 1.9E-7 | IPR012312 |
| Pfam | PF05495 | CHY zinc finger | 979 | 1054 | 5.2E-18 | IPR008913 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1045 | 1100 | 7.32E-15 | IPR037275 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1106 | 1153 | 4.86E-7 | - |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 971 | 1035 | 1.44E-16 | IPR037274 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1103 | 1151 | 2.2E-8 | IPR013083 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 632 | 856 | 1.4E-24 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 34 | 185 | 1.9E-33 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 1178 | 1220 | 1.0E-16 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 287 | 435 | 7.6E-18 | - |
| SMART | SM00184 | ring_2 | 1108 | 1149 | 1.7E-5 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1044 | 1107 | 29.642254 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 972 | 1041 | 25.539185 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1108 | 1149 | 11.235273 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 535 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_025814043.1 | zinc finger protein BRUTUS-like [Panicum hallii] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SK57 | Zinc finger protein BRUTUS (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_55247 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology