Basic Information
Locus ID:
Zma_g8368
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
JAB1/Mov34/MPN/PAD-1 ubiquitin protease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr05 | 14364485 | 14368024 | + | Zma_g8368 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 32,239.52 Da | 47.13 | 67.72 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08066 | MPN_AMSH_like | 110 | 282 | 1.00478E-89 | IPR044098 |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 116 | 211 | 3.4E-13 | IPR000555 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 108 | 238 | 9.42E-19 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 87 | 284 | 7.1E-66 | - |
| SMART | SM00232 | pad1_6 | 107 | 235 | 1.4E-12 | IPR000555 |
| ProSiteProfiles | PS50249 | MPN domain profile. | 108 | 247 | 25.251772 | IPR037518 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10600.1 | associated molecule with the SH3 domain of STAM 2. | 0 |
| RefSeq | XP_021312347.1 | AMSH-like ubiquitin thioesterase 2 [Sorghum bicolor] | 0 |
| Q6NKP9 | AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana OX=3702 GN=AMSH2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1B6Q578 | MPN domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3003G246100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology