Basic Information
Locus ID:
Zma_g7975
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
ABC transporter transmembrane region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr05 | 9025488 | 9037261 | - | Zma_g7975 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.19 | 162,863.66 Da | 37.82 | 108.65 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 272 | 559 | 1.89945E-86 | IPR044746 |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 889 | 1179 | 1.20377E-77 | IPR044726 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1202 | 1422 | 8.47535E-121 | - |
| CDD | cd03250 | ABCC_MRP_domain1 | 589 | 796 | 2.22396E-100 | - |
| Pfam | PF00005 | ABC transporter | 617 | 748 | 2.4E-17 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 894 | 1131 | 6.9E-25 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 271 | 538 | 6.0E-21 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1221 | 1369 | 7.9E-30 | IPR003439 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 892 | 1186 | 1.96E-45 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1195 | 1429 | 6.19E-69 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 617 | 808 | 3.92E-50 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 265 | 563 | 2.09E-30 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 245 | 568 | 7.2E-43 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 857 | 1185 | 1.4E-52 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1187 | 1440 | 1.3E-82 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 591 | 843 | 1.5E-68 | IPR027417 |
| SMART | SM00382 | AAA_5 | 622 | 796 | 4.6E-14 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1230 | 1415 | 4.1E-12 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 891 | 1167 | 33.346752 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1204 | 1438 | 18.43417 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 271 | 551 | 30.998526 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 583 | 819 | 20.23488 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 721 | 735 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 825 | 847 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_034596572.1 | putative ABC transporter C family member 15 [Setaria viridis] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VEZ3 | ABC transporter C family member 15 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_15750 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology