Basic Information
Locus ID:
Zma_g793
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
NPR1/NIM1 like defence protein C terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr01 | 5113818 | 5119718 | + | Zma_g793 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 73,069.82 Da | 51.01 | 92.97 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18310 | BTB_POZ_NPR_plant | 12 | 161 | 8.84212E-48 | - |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 250 | 326 | 5.0E-8 | IPR020683 |
| Pfam | PF12313 | NPR1/NIM1 like defence protein C terminal | 341 | 503 | 2.1E-37 | IPR021094 |
| SUPERFAMILY | SSF57667 | beta-beta-alpha zinc fingers | 599 | 651 | 1.55E-5 | IPR036236 |
| SUPERFAMILY | SSF54695 | POZ domain | 31 | 159 | 5.1E-7 | IPR011333 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 240 | 343 | 1.07E-15 | IPR036770 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 8 | 193 | 4.8E-14 | IPR011333 |
| Gene3D | G3DSA:1.25.40.20 | - | 234 | 370 | 8.6E-18 | IPR036770 |
| SMART | SM00248 | ANK_2a | 299 | 329 | 0.0059 | IPR002110 |
| SMART | SM00225 | BTB_4 | 30 | 161 | 4.0E-4 | IPR000210 |
| SMART | SM00248 | ANK_2a | 265 | 295 | 860.0 | IPR002110 |
| SMART | SM00614 | bed5 | 596 | 646 | 3.4E-11 | - |
| ProSiteProfiles | PS50097 | BTB domain profile. | 30 | 112 | 11.254053 | IPR000210 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 299 | 324 | 11.107922 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 299 | 324 | 11.14024 | IPR002110 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45110.1 | NPR1-like protein 3. Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays. | 0 |
| RefSeq | XP_002464110.1 | BTB/POZ domain and ankyrin repeat-containing protein NPR3 [Sorghum bicolor] | 0 |
| Q75HA6 | BTB/POZ domain and ankyrin repeat-containing protein NPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WET0 | BED-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_05276 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Sporobolus alterniflorus | 2 | Chr01G008650, Chr12G028570 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g793 |