Basic Information
Locus ID:
Zma_g7199
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr05 | 298702 | 303798 | + | Zma_g7199 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 94,062.92 Da | 48.82 | 88.54 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 571 | 704 | 1.7145E-23 | - |
| Pfam | PF17862 | AAA+ lid domain | 727 | 767 | 5.3E-11 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 573 | 703 | 1.7E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 533 | 774 | 1.26E-61 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 705 | 807 | 3.1E-97 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 532 | 813 | 3.1E-97 | IPR027417 |
| SMART | SM00382 | AAA_5 | 569 | 706 | 6.6E-21 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 676 | 695 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 767 | 788 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 518 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 237 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_039845848.1 | uncharacterized protein LOC120705524 isoform X4 [Panicum virgatum] | 0 |
| Q9P7J5 | Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC24B10.10c PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9SVE4 | AAA domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_51540 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology