Basic Information
Locus ID:
Zma_g7046
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr04 | 13457485 | 13458925 | + | Zma_g7046 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 40,912.12 Da | 44.93 | 76.64 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 232 | 268 | 1.1E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 12 | 355 | 1.81E-23 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 69 | 296 | 1.4E-21 | IPR015943 |
| SMART | SM00320 | WD40_4 | 185 | 225 | 0.38 | IPR001680 |
| SMART | SM00320 | WD40_4 | 228 | 269 | 6.4E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 3 | 38 | 220.0 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G62770.1 | Transducin/WD40 repeat-like superfamily protein. Required for autophagosome formation during nutrient deprivation and senescence. | 0 |
| RefSeq | XP_040255137.1 | autophagy-related protein 18a-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q93VB2 | Autophagy-related protein 18a OS=Arabidopsis thaliana OX=3702 GN=ATG18A PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5UMU1 | Autophagy-related protein 18a (Fragment) OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0024779 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology