Basic Information
Locus ID:
Zma_g6863
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr04 | 12368313 | 12372761 | + | Zma_g6863 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 78,031.45 Da | 40.21 | 88.49 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 425 | 693 | 5.97859E-85 | - |
| Pfam | PF13855 | Leucine rich repeat | 115 | 172 | 1.7E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.1E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 422 | 689 | 1.4E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 399 | 690 | 1.11E-66 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 246 | 3.74E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 252 | 9.0E-49 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 497 | 712 | 1.8E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 380 | 496 | 9.8E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 138 | 160 | 3.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 161 | 184 | 90.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 116 | 17.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 140 | 161 | 7.33462 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 419 | 693 | 34.435383 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 425 | 448 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 291 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_004958321.1 | protein STRUBBELIG-RECEPTOR FAMILY 7 [Setaria italica] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VQQ7 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_11254 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology