Basic Information
Locus ID:
Zma_g6569
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr04 | 10174660 | 10177181 | + | Zma_g6569 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 44,678.07 Da | 47.35 | 94.67 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 83 | 351 | 5.6E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 67 | 381 | 3.37E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 158 | 360 | 3.1E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 54 | 157 | 1.5E-34 | - |
| SMART | SM00220 | serkin_6 | 81 | 354 | 5.6E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 81 | 359 | 34.435383 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 203 | 215 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23130.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 5. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_025800491.1 | cysteine-rich receptor-like protein kinase 10 isoform X2 [Panicum hallii] | 0 |
| Q9C5S8 | Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4V6DBT5 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G350400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.3240, BH03.3426, BH03.3427, CH03.3631, CH03.3633 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_7AG0570290, gene-QOZ80_7AG0570300 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0139060.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_040836 |
| Poaceae | Oryza coarctata | 2 | Oco13G009190, Oco13G009200 |
| Poaceae | Oryza sativa | 2 | LOC_Os07g12850.1, LOC_Os07g34980.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G300600, gene-BS78_02G300700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304217 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr19G005280, Chr24G009130, Chr28G008530 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G405900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG028910, gene_TRIDC2BG032640 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G217500.1, TraesCS2B02G243000.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb106340_P001, Zm00001eb323200_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-820 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g6569, Zma_g6571 |