Basic Information
Locus ID:
Zma_g6304
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
NTMC2T4.1
Description:
ntmc2t4,ntmc2type4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr04 | 5941935 | 5950484 | + | Zma_g6304 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 55,053.28 Da | 24.44 | 102.76 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00030 | C2 | 264 | 364 | 5.56252E-29 | - |
| Pfam | PF17047 | Synaptotagmin-like mitochondrial-lipid-binding domain | 68 | 247 | 1.4E-17 | IPR039010 |
| Pfam | PF00168 | C2 domain | 262 | 358 | 1.6E-23 | IPR000008 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 260 | 392 | 2.49E-30 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 257 | 416 | 7.5E-34 | IPR035892 |
| SMART | SM00239 | C2_3c | 263 | 361 | 3.6E-20 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 245 | 364 | 20.974819 | IPR000008 |
| ProSiteProfiles | PS51847 | Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. | 66 | 248 | 24.48387 | IPR031468 |
| PRINTS | PR00360 | C2 domain signature | 304 | 317 | 2.3E-5 | IPR000008 |
| PRINTS | PR00360 | C2 domain signature | 326 | 334 | 2.3E-5 | IPR000008 |
| PRINTS | PR00360 | C2 domain signature | 279 | 291 | 2.3E-5 | IPR000008 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61050.1 | Calcium-dependent lipid-binding (CaLB domain) family protein. | 0 |
| RefSeq | XP_025804039.1 | synaptotagmin-5 [Panicum hallii] | 0 |
| Q9LEX1 | Calcium-dependent lipid-binding protein OS=Arabidopsis thaliana OX=3702 GN=CLB PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7ENE6 | Synaptotagmin-5 OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G100300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology