Basic Information
Locus ID:
Zma_g6296
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr04 | 5526652 | 5531190 | - | Zma_g6296 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.08 | 77,634.81 Da | 59.36 | 72.06 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 399 | 424 | 7.7E-4 | IPR001876 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 365 | 393 | 2.6E-9 | IPR001876 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 358 | 394 | 1.57E-7 | IPR036443 |
| Gene3D | G3DSA:4.10.1060.10 | - | 396 | 428 | 3.5E-9 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 357 | 395 | 4.2E-16 | - |
| SMART | SM00547 | zf_4 | 400 | 424 | 1.5E-4 | IPR001876 |
| SMART | SM00547 | zf_4 | 367 | 391 | 2.1E-6 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 365 | 394 | 10.116323 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 398 | 427 | 9.450083 | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 369 | 388 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 402 | 421 | - | IPR001876 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 665 | 689 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 645 | 689 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55040.1 | zinc finger (Ran-binding) family protein. | 0 |
| RefSeq | XP_039792241.1 | uncharacterized protein LOC120658099 [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9VV15 | Zinc finger protein VAR3, chloroplastic (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_12844 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology