Basic Information
Locus ID:
Zma_g5772
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
60S ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr03 | 12246539 | 12248510 | + | Zma_g5772 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.51 | 21,010.66 Da | 40.05 | 86.58 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 2 | 186 | 3.2E-95 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 20 | 139 | 1.3E-26 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 1 | 187 | 7.1E-101 | - |
| ProSitePatterns | PS01106 | Ribosomal protein L18e signature. | 50 | 67 | - | IPR021132 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 187 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27850.1 | Ribosomal protein L18e/L15 superfamily protein. | 0 |
| RefSeq | NP_001131538.1 | 60S ribosomal protein L18-3 [Zea mays] | 0 |
| Q940B0 | Large ribosomal subunit protein eL18x OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6T8R6 | Ribosomal_L18e/L15P domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM03G16110 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology