Basic Information
Locus ID:
Zma_g5711
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
RhoGAP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr03 | 11930794 | 11939177 | + | Zma_g5711 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 95,396.53 Da | 52.97 | 81.46 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 24 | 123 | 2.23757E-11 | - |
| CDD | cd00159 | RhoGAP | 184 | 321 | 1.77193E-35 | - |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 601 | 681 | 4.7E-21 | IPR025757 |
| Pfam | PF00169 | PH domain | 23 | 127 | 9.7E-12 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 184 | 328 | 4.6E-31 | IPR000198 |
| SUPERFAMILY | SSF50729 | PH domain-like | 19 | 128 | 8.49E-17 | - |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 184 | 377 | 1.96E-33 | IPR008936 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 154 | 377 | 4.7E-41 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 11 | 129 | 5.0E-16 | IPR011993 |
| SMART | SM00324 | RhoGAP_3 | 181 | 372 | 1.4E-25 | IPR000198 |
| SMART | SM00233 | PH_update | 22 | 130 | 6.7E-16 | IPR001849 |
| ProSiteProfiles | PS50003 | PH domain profile. | 21 | 128 | 15.8212 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 175 | 375 | 30.727362 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 834 | 872 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 501 | - | - |
| Coils | Coil | Coil | 664 | 684 | - | - |
| Coils | Coil | Coil | 591 | 625 | - | - |
| Coils | Coil | Coil | 805 | 825 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_004958565.1 | rho GTPase-activating protein 7 isoform X3 [Setaria italica] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | K3ZQL6 | Rho GTPase-activating protein 7-like OS=Setaria italica OX=4555 GN=101765349 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology