Basic Information
Locus ID:
Zma_g5666
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr03 | 11709831 | 11714527 | - | Zma_g5666 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 65,318.00 Da | 47.66 | 83.32 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 134 | 396 | 5.01795E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 135 | 397 | 9.4E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 133 | 461 | 3.91E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 425 | 579 | 1.95E-16 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 128 | 223 | 3.5E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 422 | 576 | 1.5E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 224 | 412 | 1.6E-58 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 415 | 506 | 1.5E-15 | - |
| SMART | SM00220 | serkin_6 | 135 | 397 | 2.1E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 135 | 397 | 50.350269 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 439 | 474 | 8.794848 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 141 | 167 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 259 | 271 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 61 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_025800975.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1-like [Panicum hallii] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T8KT77 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G465100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology