halophFGD

Basic Information

Locus ID: Zma_g5574

Species & Taxonomic ID: Zoysia macrostachya & 121788

Genome Assembly: GCA_049640385.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zma_chr03	11262345	11262611	-	Zma_g5574

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
11.49	9,921.62 Da	70.66	127.39	0.37

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_012699216.1	F-box/LRR-repeat protein 25 [Setaria italica]	0
TrEMBL	A0A5J9VQS7	F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_11218 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	17	AH03.2980, AH03.3016, AH03.3734, BH03.3179, BH03.3186 ... BH03.4012, BH03.4013, BH03.4260, CH02.1632, CH03.3342, CH03.3348, CH03.3349, CH03.3358, CH03.3373, CH03.4281, CH07.236, CH07.241
Poaceae	Eleusine coracana subsp. coracana	13	gene-QOZ80_1AG0040150, gene-QOZ80_5AG0362280 ... gene-QOZ80_7AG0567200, gene-QOZ80_7AG0567380, gene-QOZ80_7AG0567490, gene-QOZ80_7AG0577600, gene-QOZ80_7BG0598680, gene-QOZ80_7BG0598840, gene-QOZ80_7BG0598930, gene-QOZ80_7BG0601540, gene-QOZ80_8AG0640840, gene-QOZ80_8AG0640850, gene-QOZ80_8BG0643680
Poaceae	Hordeum vulgare	14	HORVU.MOREX.r3.1HG0084540.1, HORVU.MOREX.r3.2HG0195010.1 ... HORVU.MOREX.r3.2HG0188030.1.CDS1, HORVU.MOREX.r3.4HG0395670.1, HORVU.MOREX.r3.4HG0415360.1, HORVU.MOREX.r3.4HG0418200.1, HORVU.MOREX.r3.6HG0632570.1, HORVU.MOREX.r3.7HG0731450.1, HORVU.MOREX.r3.7HG0737880.1, HORVU.MOREX.r3.7HG0745040.1.CDS1, HORVU.MOREX.r3.7HG0745200.1, HORVU.MOREX.r3.7HG0745250.1, HORVU.MOREX.r3.7HG0745320.1, HORVU.MOREX.r3.7HG0745500.1
Poaceae	Lolium multiflorum	36	gene-QYE76_000424, gene-QYE76_001664, gene-QYE76_003032 ... gene-QYE76_006384, gene-QYE76_006396, gene-QYE76_006472, gene-QYE76_006476, gene-QYE76_025646, gene-QYE76_026198, gene-QYE76_036283, gene-QYE76_036711, gene-QYE76_036712, gene-QYE76_036713, gene-QYE76_036716, gene-QYE76_036719, gene-QYE76_036720, gene-QYE76_041359, gene-QYE76_049657, gene-QYE76_059691, gene-QYE76_059693, gene-QYE76_060055, gene-QYE76_071578, gene-QYE76_071580, gene-QYE76_071595, gene-QYE76_071600, gene-QYE76_071606, gene-QYE76_071634, gene-QYE76_071635, gene-QYE76_071697, gene-QYE76_071698, gene-QYE76_071704, gene-QYE76_071731, gene-QYE76_071733, gene-QYE76_071734, gene-QYE76_071799, gene-QYE76_071861
Poaceae	Oryza coarctata	1	Oco13G009530
Poaceae	Oryza sativa	1	LOC_Os12g36000.1
Poaceae	Paspalum vaginatum	4	gene-BS78_02G277100, gene-BS78_02G277800 ... gene-BS78_02G277900, gene-BS78_06G208700
Poaceae	Puccinellia tenuiflora	18	Pt_Chr0100991, Pt_Chr0100992, Pt_Chr0106729, Pt_Chr0106914 ... Pt_Chr0106915, Pt_Chr0300155, Pt_Chr0303262, Pt_Chr0303312, Pt_Chr0306558, Pt_Chr0401318, Pt_Chr0401613, Pt_Chr0401615, Pt_Chr0401618, Pt_Chr0401619, Pt_Chr0401620, Pt_Chr0401621, Pt_Chr0404054, Pt_Chr0701494
Poaceae	Sporobolus alterniflorus	4	Chr0G002260, Chr24G005000, Chr28G006610, Chr28G006620
Poaceae	Thinopyrum elongatum	23	Tel2E01G573100, Tel2E01G761200, Tel2E01G785900 ... Tel3E01G652100, Tel4E01G552600, Tel4E01G597600, Tel4E01G598200, Tel5E01G045400, Tel5E01G104300, Tel6E01G160800, Tel7E01G598300, Tel7E01G806500, Tel7E01G808300, Tel7E01G808800, Tel7E01G810100, Tel7E01G851100, Tel7E01G899500, Tel7E01G901500, Tel7E01G901700, Tel7E01G901900, Tel7E01G902000, Tel7E01G902100, Tel7E01G902900
Poaceae	Triticum dicoccoides	18	gene_TRIDC2AG047970, gene_TRIDC2BG050460 ... gene_TRIDC2BG071150, gene_TRIDC4BG060960, gene_TRIDC4BG060990, gene_TRIDC5AG075660, gene_TRIDC5AG075680, gene_TRIDC5BG008230, gene_TRIDC5BG078890, gene_TRIDC7AG072750, gene_TRIDC7AG072880, gene_TRIDC7AG072920, gene_TRIDC7BG041510, gene_TRIDC7BG060240, gene_TRIDC7BG060300, gene_TRIDC7BG068870, gene_TRIDC7BG068910, gene_TRIDC7BG069090
Poaceae	Triticum aestivum	52	TraesCS2A02G333300.1, TraesCS2A02G465500.1 ... TraesCS2B02G469900.1, TraesCS2B02G487000.1, TraesCS2B02G487100.1, TraesCS2D02G327500.1, TraesCS2D02G448100.1, TraesCS2D02G465900.2, TraesCS3A02G410300.1, TraesCS3A02G410400.1, TraesCS3B02G443700.1, TraesCS3D02G405000.1, TraesCS3D02G405100.1, TraesCS4B02G364600.1, TraesCS4B02G365200.1, TraesCS4B02G365300.1, TraesCS4B02G393800.1, TraesCS5A02G533800.3, TraesCS5B02G049300.1, TraesCS5D02G055200.1, TraesCS6A02G066700.1, TraesCS7A02G374600.1, TraesCS7A02G497700.1, TraesCS7A02G518600.1, TraesCS7A02G518700.1, TraesCS7A02G519100.1, TraesCS7A02G519300.1, TraesCS7A02G519400.1, TraesCS7A02G519900.1, TraesCS7B02G225700.1, TraesCS7B02G252800.1, TraesCS7B02G379200.1, TraesCS7B02G433600.1.cds1, TraesCS7B02G434600.1, TraesCS7B02G434900.1, TraesCS7B02G435200.1, TraesCS7B02G435400.1, TraesCS7B02G436000.1, TraesCS7B02G436300.1, TraesCS7D02G141800.1, TraesCS7D02G321600.1, TraesCS7D02G464500.1, TraesCS7D02G465100.1, TraesCS7D02G485000.1, TraesCS7D02G508300.1, TraesCS7D02G508500.1, TraesCS7D02G508600.1, TraesCS7D02G509000.1, TraesCS7D02G509600.1, TraesCSU02G117400.1, TraesCSU02G138500.1, TraesCSU02G139200.1
Poaceae	Zea mays	1	Zm00001eb105050_P001
Poaceae	Zoysia japonica	3	nbis-gene-1023, nbis-gene-32928, nbis-gene-32976
Poaceae	Zoysia macrostachya	2	Zma_g5574, Zma_g6436