Basic Information
Locus ID:
Zma_g5419
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr03 | 10283375 | 10284349 | + | Zma_g5419 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 37,485.57 Da | 65.08 | 50.03 | -1.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 220 | - | - |
| Coils | Coil | Coil | 184 | 204 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_006657880.1 | glutamic acid-rich protein-like [Oryza brachyantha] | 0 |
| TrEMBL | A0A5J9VRQ3 | UBC core domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_11610 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.3479, BH03.3693, CH03.3658, CH03.3896, CH03.3900 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0574250, gene-QOZ80_7BG0605530 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0131570.1.CDS1 |
| Poaceae | Oryza coarctata | 3 | Oco13G002330, Oco13G010850, Oco14G011590 |
| Poaceae | Oryza sativa | 2 | LOC_Os07g07820.1, LOC_Os07g38950.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G326200 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr19G003650, Chr24G011010, Chr27G013620, Chr28G010240 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG023840, gene_TRIDC2BG029300 |
| Poaceae | Triticum aestivum | 2 | TraesCS2A02G187100.1.cds1, TraesCS2D02G200800.1.cds1 |
| Poaceae | Zea mays | 2 | Zm00001eb107550_P001, Zm00001eb325390_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-10513, nbis-gene-606 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g5419, Zma_g6711 |