HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Zma_g5044
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr03 5651461 5651868 - Zma_g5044
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.05 15,261.58 Da 44.99 83.70 -0.37
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 107 135 - -
MobiDBLite mobidb-lite consensus disorder prediction 116 135 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_035816135.1 uncharacterized protein LOC103630694 isoform X1 [Zea mays] 0
TrEMBL A0A3L6TWK9 DUF4283 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G08650 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 53 AH01.2876, AH01.32, AH02.628, AH03.1625, AH03.1818, AH06.974 ...
AH03.2386, AH03.3791, AH05.2232, AH05.2365, AH05.3376, AH05.3377, AH07.1084, AH09.216, BH01.2924, BH01.2942, BH01.4430, BH02.2488, BH02.375, BH03.2585, BH03.3111, BH04.1454, BH04.2033, BH04.641, BH05.2434, BH06.2036, BH06.2594, BH07.2578, BH07.3486, BH08.2352, BH09.139, BH09.2381, BH09.2658, BH09.696, BH09.703, CH01.3699, CH03.848, CH04.1465, CH04.2024, CH04.2118, CH06.1197, CH06.2628, CH07.1997, CH08.1709, CH08.940, CH09.13, CH09.3169, CH09.4, CH09.503, CH09.643, CH09.813, Contig1593.5, Contig328.10
Poaceae Lolium multiflorum 1 gene-QYE76_046977
Poaceae Oryza coarctata 1 Oco17G000100
Poaceae Paspalum vaginatum 8 gene-BS78_01G253900, gene-BS78_02G100600, gene-BS78_K215400 ...
gene-BS78_02G149600, gene-BS78_05G265400, gene-BS78_07G063300, gene-BS78_08G130200, gene-BS78_09G053800
Poaceae Puccinellia tenuiflora 2 Pt_Chr0302147, Pt_Chr0601454
Poaceae Sporobolus alterniflorus 11 Chr01G023520, Chr01G024930, Chr05G016830, Chr05G025730 ...
Chr06G032710, Chr10G017280, Chr13G010300, Chr16G005030, Chr24G008800, Chr24G013200, Chr31G006060
Poaceae Zoysia macrostachya 1 Zma_g5044
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.